feat(questionnaire): integrate revised intake and follow-up monitoring
CI / ruff · pytest (pull_request) Successful in 55s
CI / ruff · pytest (pull_request) Successful in 55s
Add gated TSQ, Russian C-SSRS Recent, durable responses and notifications, diaries, schedules and audited clinical review. Preserve manual assessment when the Russian follow-up source is unavailable. Refs #52
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"""Versioned release gate and deterministic follow-up planning."""
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from calendar import monthrange
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from datetime import date, timedelta
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from pathlib import Path
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from typing import Literal
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from zoneinfo import ZoneInfo
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import yaml
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from pydantic import BaseModel, ConfigDict, Field, model_validator
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from app.config import get_settings
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from app.core.questionnaire import Approval, load_policy
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class RuntimePolicy(BaseModel):
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model_config = ConfigDict(extra="forbid", frozen=True)
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version: str
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enabled: bool = False
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approval: Approval | None = None
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content_review: Approval | None = None
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contact_review: Approval | None = None
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timezone: str
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daily_hour: int = Field(ge=0, le=23)
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mood_baseline_days: int = Field(ge=2)
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mood_bad_days: int = Field(ge=1)
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mood_drop: int = Field(ge=1, le=10)
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sleep_bad_days: int = Field(ge=1)
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sleep_hours_below: float = Field(gt=0, le=24)
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nightmares_at: int = Field(ge=0, le=4)
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missed_medication_days: int = Field(ge=1)
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high_risk_silence_days: int = Field(ge=1)
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medication_days: tuple[int, ...]
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medication_repeat_days: int = Field(ge=1)
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route_intervals: dict[str, dict[str, int]]
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alcohol_repeat_days: int = Field(ge=1)
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phq9_retriage_delta: int = Field(ge=1)
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pcl5_retriage_delta: int = Field(ge=1)
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@model_validator(mode="after")
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def valid(self):
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ZoneInfo(self.timezone)
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if set(self.route_intervals) != {"after_crisis", "specialist", "self_help"} or any(
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set(row) != {"phq9", "pcl5"} for row in self.route_intervals.values()
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):
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raise ValueError("all route and scale intervals must be defined")
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if not self.medication_days or tuple(sorted(set(self.medication_days))) != self.medication_days:
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raise ValueError("medication days must be nonempty and strictly increasing")
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if self.medication_days[0] < 1 or any(v < 1 for row in self.route_intervals.values() for v in row.values()):
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raise ValueError("intervals must be positive")
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if any(
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a and a.policy_version != self.version for a in (self.approval, self.content_review, self.contact_review)
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):
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raise ValueError("review must match the runtime version")
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return self
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@property
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def released(self) -> bool:
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return self.enabled and all((self.approval, self.content_review, self.contact_review))
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def load_runtime(path: Path | None = None) -> RuntimePolicy:
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path = path or get_settings().config_dir / "intake_runtime.yaml"
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return RuntimePolicy.model_validate(yaml.safe_load(path.read_text()))
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def intake_enabled() -> bool:
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return load_runtime().released and load_policy().approval is not None
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def month_before(day: date, months: int = 1) -> date:
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year, month = divmod(day.year * 12 + day.month - 1 - months, 12)
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return day.replace(year=year, month=month + 1, day=min(day.day, monthrange(year, month + 1)[1]))
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def due_scales(
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*,
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today: date,
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enrolled: date,
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last: dict[str, date],
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route: Literal["specialist", "self_help"],
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medication_changed: date | None = None,
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after_crisis: date | None = None,
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policy: RuntimePolicy | None = None,
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) -> tuple[str, ...]:
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"""Return each overdue form once. Therapy day zero is the recorded start/change date.
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Due dates stay due until completion. Overlapping schedules choose the earlier
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date; missed ticks do not create a burst of historical questionnaires.
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"""
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p = policy or load_runtime()
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due = set()
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for scale in ("phq9", "pcl5"):
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completed = last.get(scale)
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dates = [(completed or enrolled) + timedelta(days=p.route_intervals[route][scale])]
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if after_crisis and after_crisis <= today:
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dates.append(
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max(completed or after_crisis, after_crisis) + timedelta(days=p.route_intervals["after_crisis"][scale])
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)
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if medication_changed and medication_changed <= today:
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for offset in p.medication_days:
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milestone = medication_changed + timedelta(days=offset)
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if completed is None or completed < milestone:
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dates.append(milestone)
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break
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else:
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dates.append(
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max(completed or medication_changed, medication_changed + timedelta(days=p.medication_days[-1]))
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+ timedelta(days=p.medication_repeat_days)
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)
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if min(dates) <= today:
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due.add(scale)
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if (last.get("rus_audit_s") or enrolled) + timedelta(days=p.alcohol_repeat_days) <= today:
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due.add("rus_audit_s")
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return tuple(sorted(due))
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def diary_flags(history: dict[date, dict], today: date, policy: RuntimePolicy | None = None) -> tuple[str, ...]:
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"""Consecutive calendar dates; missing data never become zero or missed doses.
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Baseline is the seven dates BEFORE the three-day deterioration window;
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every baseline value is required. Nightmares OR short sleep must hold on
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each of three nights. These candidate definitions require signed review.
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"""
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p = policy or load_runtime()
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flags = []
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current = history.get(today, {})
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if current.get("death_thoughts") == 1:
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flags.append("suicide_assessment_now")
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recent = [history.get(today - timedelta(days=i), {}) for i in range(p.mood_bad_days)]
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baseline = [
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history.get(today - timedelta(days=i), {}).get("mood")
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for i in range(p.mood_bad_days, p.mood_bad_days + p.mood_baseline_days)
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]
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if all(x is not None for x in baseline) and all(x.get("mood") is not None for x in recent):
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mean = sum(baseline) / len(baseline)
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if all(mean - x["mood"] >= p.mood_drop for x in recent):
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flags.append("phq9_due_mood")
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nights = [history.get(today - timedelta(days=i), {}) for i in range(p.sleep_bad_days)]
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if all(
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(r.get("nightmares") is not None and r["nightmares"] >= p.nightmares_at)
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or (r.get("sleep_hours") is not None and r["sleep_hours"] < p.sleep_hours_below)
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for r in nights
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):
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flags.append("sleep_review")
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doses = [history.get(today - timedelta(days=i), {}) for i in range(p.missed_medication_days)]
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if all(r.get("medication") == "none" for r in doses):
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flags.append("medication_contact")
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if current.get("side_effects") == 1:
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flags.append("side_effects_review")
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if current.get("medication") == "partial":
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flags.append("partial_medication_review")
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return tuple(flags)
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