Merge pull request 'feat(web): приложение пациента — двухэтапные опросы, результат скрининга, дневник по результату' (#79) from feat/rag-clinical-guidelines into dev
CI / ruff · pytest (push) Successful in 2m2s

This commit was merged in pull request #79.
This commit is contained in:
2026-10-04 15:25:16 +03:00
80 changed files with 12530 additions and 418 deletions
+3 -1
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@@ -70,7 +70,9 @@ async def onboarding_entry(ctx: Ctx, after: str | None = None) -> str:
modules = list(profile.modules) if profile is not None and profile.modules else []
from app.core.intake_runtime import intake_enabled
if after is None and intake_enabled() and any(m in modules for m in ("veteran", "depression")):
# Stage 1 is the same for everyone (ADR-012): it does not depend on modules, which it sets itself — an anonymous
# person has no profile at all before it.
if after is None and intake_enabled():
return "intake.start"
if after in modules:
modules = modules[modules.index(after) + 1 :]
+131 -57
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@@ -4,9 +4,13 @@ import math
from dataclasses import asdict, replace
from zoneinfo import ZoneInfo
from app.core import interpretation
from app.core.intake_questions import (
DIARY_KINDS,
Question,
content,
cssrs_answers,
cssrs_since_contact_question,
diary_questions,
group_answers,
next_intake,
@@ -17,6 +21,7 @@ from app.core.intake_runtime import diary_flags, intake_enabled, load_runtime
from app.core.questionnaire import alcohol_expansion, load_policy, score_alcohol, score_cssrs_recent
from app.core.scales import load_scale
from app.core.types import AlertLevel
from app.db import repo
from app.db.intake import QuestionnaireRecord, QuestionnaireTask
from app.dialog.contracts import Button, Event, Reply
from app.dialog.crisis import crisis_open, open_crisis
@@ -28,21 +33,23 @@ def allowed(ctx):
return ctx.data.get("consent") is True and ctx.data.get("adult") is True and intake_enabled()
def side_effects_question():
"""FIBSER-style tolerability question added to the full scales while a medication is active («Этап 2», p.3)."""
return Question("side_effects", texts()["side_effects"], ((1, "Да"), (0, "Нет")), "past_week")
def next_question(row):
a = row.answers
if row.kind == "intake":
return next_intake(a, load_policy(), row.details.get("sex"))
if row.kind == "diary":
for q in diary_questions(
row.details["modules"], suicide_monitoring=row.details["suicide_monitoring"], weekday=row.day.weekday()
):
if row.kind == "cssrs_since_contact":
return cssrs_since_contact_question(a)
if row.kind in DIARY_KINDS:
part = row.kind.removeprefix("diary_")
for q in diary_questions(part, row.details["modules"], day_index=row.details.get("day_index", 0)):
if q.id in a:
continue
if q.id == "medication_reason" and a.get("medication") not in ("partial", "none"):
continue
if q.id == "side_effects" and a.get("medication") == "not_prescribed":
continue
if q.id == "thought_intensity" and a.get("death_thoughts") != 1:
if q.id == "medication_reason" and a.get("medication") != "no":
continue
return q
return None
@@ -63,11 +70,7 @@ def next_question(row):
q = replace(q, text=q.text.replace("последний месяц", "последнюю неделю"), period="past_week")
return q
if row.details.get("medication_active") and "side_effects" not in a:
return next(
q
for q in diary_questions([], suicide_monitoring=False, weekday=row.day.weekday())
if q.id == "side_effects"
)
return side_effects_question()
return None
@@ -89,7 +92,7 @@ async def urgent(ctx, row=None, *, code="help_now", categories=None):
if profile:
profile.enhanced_monitoring = True
flags = list(service.decision(row).flags) if row else []
if row and (row.answers.get("death_thoughts") == 1 or row.answers.get("phq9_9", 0) > 0):
if row and (row.answers.get("dphq_9", 0) > 0 or row.answers.get("phq9_9", 0) > 0):
flags.append("cssrs_since_contact_required")
if row:
await service.finish(ctx, row, "interrupted", extra={"stop_reason": code, "flags": flags})
@@ -132,7 +135,8 @@ async def advance(ctx, row):
a = row.answers
c = score_cssrs_recent(cssrs_answers(a))
policy = load_policy()
if a.get("phq9_9", 0) > 0 or a.get("death_thoughts") == 1 or c.risk_lower_bound == "high":
# PHQ-9 item 9 ≥1 — in the full scale or in the depression module of the diary — stops at once (stage 1 rule).
if a.get("phq9_9", 0) > 0 or a.get("dphq_9", 0) > 0 or c.risk_lower_bound == "high":
return await urgent(ctx, row, code="suicide_signal")
if c.positive and policy.cssrs_positive_policy == "stop_any":
return await urgent(ctx, row, code="cssrs_positive")
@@ -153,9 +157,6 @@ async def advance(ctx, row):
ctx.now,
params={"record_id": row.id},
)
if row.kind == "cssrs_since_contact":
# Recent and Since Last Contact are different instruments. No silent substitution.
return await manual_review(ctx, row, "cssrs_since_contact_required")
try:
q = next_question(row)
# Validate preserved short answers against a newly answered full-form item 1.
@@ -187,6 +188,8 @@ async def advance(ctx, row):
extra = {"decision": asdict(result), "totals": service.summary(row)}
if a.get("recent_trauma") == 1:
extra["recent_trauma"] = True
extra["interpretation"] = interpretation.intake_interpretation(extra["totals"], a, result, policy)
await apply_modules(ctx, extra["interpretation"]["modules"])
if result.primary_route != "self_help" or result.flags or result.parallel_routes or a.get("recent_trauma"):
await service.alert(
ctx.session,
@@ -196,23 +199,29 @@ async def advance(ctx, row):
ctx.now,
params={"record_id": row.id, **extra},
)
elif row.kind == "diary":
history = {
r.day: r.answers
for r in await service.records(ctx.session, ctx.token)
if r.kind == "diary" and r.status == "complete"
}
history[row.day] = a
flags = diary_flags(history, row.day)
elif row.kind == "cssrs_since_contact":
extra["totals"] = {"cssrs_recent": asdict(c)}
extra["interpretation"] = interpretation.cssrs_interpretation(c.risk)
elif row.kind in DIARY_KINDS:
# Morning and evening answers of one date form one diary day.
history: dict = {}
for r in await service.records(ctx.session, ctx.token):
if r.kind in DIARY_KINDS and r.status == "complete" and r.id != row.id:
history.setdefault(r.day, {}).update(r.answers)
history.setdefault(row.day, {}).update(a)
flags = diary_flags(history, row.day, medication_active=row.details.get("medication_active", False))
extra["flags"] = flags
for flag in flags:
await service.alert(
ctx.session, ctx.token, row.id + ":" + flag, flag, ctx.now, params={"record_id": row.id}
)
if flag == "phq9_due_mood":
await service.queue_task(ctx.session, ctx.token, "phq9", row.id + ":phq9", ctx.now)
if flag in DIARY_SCALE_TASKS:
sid = DIARY_SCALE_TASKS[flag]
await service.queue_task(ctx.session, ctx.token, sid, row.id + ":" + sid, ctx.now)
extra["interpretation"] = interpretation.diary_interpretation(row.kind.removeprefix("diary_"), flags)
else:
extra["totals"] = service.summary(row)
runtime = load_runtime()
if row.kind in ("phq9", "pcl5"):
sid = row.kind
total = extra["totals"][sid]["total"]
@@ -223,27 +232,37 @@ async def advance(ctx, row):
if total >= priority
else ("psychiatrist_or_psychotherapist" if total >= specialist else "review_with_treating_clinician")
)
prior = next(
(
r
for r in reversed(await service.records(ctx.session, ctx.token))
if r.id != row.id
and r.status == "complete"
and r.version == row.version
and r.details.get("totals", {}).get(sid, {}).get("complete")
and (sid != "pcl5" or r.details.get("weekly_pcl", False) == row.details.get("weekly_pcl", False))
),
None,
)
earlier = [
r
for r in await service.records(ctx.session, ctx.token)
if r.id != row.id
and r.status == "complete"
and r.version == row.version
and r.details.get("totals", {}).get(sid, {}).get("complete")
and (sid != "pcl5" or r.details.get("weekly_pcl", False) == row.details.get("weekly_pcl", False))
]
prior = earlier[-1] if earlier else None
if prior:
change = total - prior.details["totals"][sid]["total"]
extra["delta"] = {
"baseline_record": prior.id,
"value": change,
"retriage": change >= getattr(load_runtime(), sid + "_retriage_delta"),
"retriage": change >= getattr(runtime, sid + "_retriage_delta"),
}
extra["interpretation"] = interpretation.scale_interpretation(
sid,
extra["totals"],
baseline=earlier[0].details["totals"][sid]["total"] if earlier else None,
previous=prior.details["totals"][sid]["total"] if prior else None,
policy=policy,
retriage_delta=getattr(runtime, sid + "_retriage_delta"),
)
if row.kind == "rus_audit_s" and not row.details.get("sex"):
return await manual_review(ctx, row, "alcohol_sex_unknown")
if row.kind == "rus_audit_s":
extra["interpretation"] = interpretation.scale_interpretation(
"rus_audit_s", extra["totals"], baseline=None, previous=None, policy=policy, retriage_delta=0
)
if extra["totals"]["rus_audit"].get("zone") == 4:
extra["parallel_routes"] = ["narcologist"]
retriage = extra.get("delta", {}).get("retriage", False)
@@ -257,13 +276,48 @@ async def advance(ctx, row):
params={"record_id": row.id, **extra},
)
await service.finish(ctx, row, "complete", extra=extra)
shown = interpretation.render(extra["interpretation"]) if extra.get("interpretation") else texts()["done"]
if row.kind == "cssrs_since_contact" and not await done_today(ctx, "diary_evening"):
# The risk questions open the evening diary; continue straight into it.
step = await start(ctx, "diary_evening")
step.replies.insert(0, Reply(text=shown, kind="info"))
return step
from app.dialog.flows.core import menu_reply
replies = [menu_reply(ctx, texts()["done"])]
alcohol_total = extra.get("totals", {}).get("rus_audit", {})
if alcohol_total.get("zone") in (2, 3):
replies.insert(0, Reply(text=texts()["alcohol_advice"], kind="info"))
return Step(replies=replies, next_state="idle", data={"questionnaire_record": None})
return Step(replies=[menu_reply(ctx, shown)], next_state="idle", data={"questionnaire_record": None})
# Diary flags that bring a full scale forward («Этап 2», p.4).
DIARY_SCALE_TASKS = {
"phq9_due_mood": "phq9",
"phq9_due_depression": "phq9",
"pcl5_due_ptsd": "pcl5",
"rus_audit_due_alcohol": "rus_audit_s",
}
async def apply_modules(ctx, modules):
"""Stage 1 result → diary modules of stage 2. Without a doctor the screening defines them; a doctor's modules
(diagnosis from ЕМИАС) are kept and only extended."""
profile = await ctx.profile()
if profile is None:
await repo.upsert_profile(ctx.session, token=ctx.token, doctor_id="", modules=list(modules))
return
current = list(profile.modules or [])
merged = [*current, *(m for m in modules if m not in current)] if profile.doctor_id else list(modules)
await repo.upsert_profile(ctx.session, token=ctx.token, modules=merged)
def local_day(ctx):
return ctx.now.astimezone(ZoneInfo(load_runtime().timezone)).date()
async def done_today(ctx, kind):
day = local_day(ctx)
return any(
r.kind == kind and r.day == day and r.status == "complete"
for r in await service.records(ctx.session, ctx.token)
)
async def start(ctx, kind="intake", task=None):
@@ -288,6 +342,8 @@ async def start(ctx, kind="intake", task=None):
if task:
return Step()
return Step(replies=[Reply(text=texts()["review"], kind="info")])
# A manual start takes over the scheduled task of the same form, so the task does not stay outstanding.
task = task or await service.outstanding_task(ctx.session, ctx.token, kind)
row = await service.create_record(ctx, kind, task=task)
return await advance(ctx, row)
@@ -316,14 +372,28 @@ async def checkin(ctx, event):
existing = await service.records(ctx.session, ctx.token)
if not any(r.kind == "intake" and r.status == "complete" for r in existing):
return await start(ctx)
day = ctx.now.astimezone(ZoneInfo(load_runtime().timezone)).date()
if any(r.kind == "diary" and r.day == day and r.status == "complete" for r in existing):
return Step(replies=[Reply(text=texts()["done"], kind="info")])
risk_task = await service.queue_task(ctx.session, ctx.token, "cssrs_since_contact", f"cssrs:{day}", ctx.now)
if risk_task.status in ("pending", "active"):
await service.queue_task(ctx.session, ctx.token, "diary", f"diary:{day}", ctx.now)
return await start(ctx, "cssrs_since_contact", risk_task)
return await start(ctx, "diary")
return await next_diary(ctx)
async def next_diary(ctx):
"""The part of today's diary that is still open: morning first, then evening. The evening opens with the C-SSRS
«since last contact» when the profile is under suicide-risk monitoring («Этап 2», module of suicide risk)."""
day = local_day(ctx)
done = {r.kind for r in await service.records(ctx.session, ctx.token) if r.day == day and r.status == "complete"}
for kind in DIARY_KINDS:
if kind in done:
continue
profile = await ctx.profile()
if kind == "diary_evening" and profile and profile.enhanced_monitoring and "cssrs_since_contact" not in done:
risk_task = await service.queue_task(ctx.session, ctx.token, "cssrs_since_contact", f"cssrs:{day}", ctx.now)
return await start(ctx, "cssrs_since_contact", risk_task)
return await start(ctx, kind)
return Step(replies=[Reply(text=texts()["diary_done"], kind="info")])
@trigger("button:diary:next")
async def diary_button(ctx, event):
return await next_diary(ctx)
@state("intake")
@@ -365,12 +435,16 @@ async def collect(ctx, event: Event):
elif event.type == "text" and q.numeric:
try:
value = float(str(ctx.text).replace(",", "."))
valid = math.isfinite(value) and 0 <= value <= 24
valid = math.isfinite(value) and 0 <= value <= q.maximum
except ValueError:
pass
elif event.type == "text" and q.optional:
value, valid = str(ctx.text)[:2000], True
if not valid:
return Step(replies=[Reply(text=texts()["numeric" if q.numeric else "invalid"]), question_reply(row, q)])
hint = "invalid" if not q.numeric else ("numeric_portions" if q.id == "alcohol_portions" else "numeric")
return Step(replies=[Reply(text=texts()[hint]), question_reply(row, q)])
service.save_answer(row, q, value, ctx.now)
if row.kind == "cssrs_since_contact" and q.id == "cssrs_q6_lifetime":
# Behaviour since the last contact is recent by definition (see cssrs_since_contact_question).
service.save_answer(row, replace(q, id="cssrs_q6_recent"), value, ctx.now, derived=True)
return await advance(ctx, row)
+9 -3
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@@ -47,6 +47,8 @@ from app.llm.med_qa import DOSE_QUESTION, fallback_text, med_qa
QUESTION_STATE = "meds.question"
SIDE_EFFECT_TEXT_STATE = "meds.side_effect_text"
# A client sends this button when the person submits a free-text step without writing anything.
NO_COMMENT = "text:skip"
SIDE_EFFECT_CODES = ("nausea", "insomnia", "headache", "dizziness", "agitation", "other")
SKIP_REASONS = ("forgot", "side_effects", "quit", "other")
@@ -379,7 +381,8 @@ def _side_effect_code(code: str) -> Any:
async def handler(ctx: Ctx, event: Event, ref: str) -> Step:
if code == "other":
return Step(
replies=[Reply(text=load_meds_texts().side_effects.describe)],
# kind="question": the engine waits for free text here (clients show an input, optional).
replies=[Reply(text=load_meds_texts().side_effects.describe, kind="question")],
next_state=SIDE_EFFECT_TEXT_STATE,
data={"med_se_ref": ref},
)
@@ -394,12 +397,15 @@ for _code in SIDE_EFFECT_CODES:
@state(SIDE_EFFECT_TEXT_STATE)
async def _side_effect_text(ctx: Ctx, event: Event) -> Step:
ref = ctx.data.get("med_se_ref")
if event.type == "button" and event.button == NO_COMMENT:
# The description is optional: «other» side effect without words.
return await _after_side_effects(ctx, ["other"], str(ref) if ref else None)
if event.type != "text" or ctx.text is None:
return await leave_to_idle(ctx, event, {"med_se_ref": None})
facts = await ctx.gateway.extract_checkin(ctx.text)
# Store only normalised codes, never the description itself (it stays in the scrubbed message log).
codes = [str(c) for c in facts.side_effects] if facts is not None and facts.side_effects else ["other"]
ref = ctx.data.get("med_se_ref")
return await _after_side_effects(ctx, codes, str(ref) if ref else None)
@@ -429,7 +435,7 @@ async def _menu_question(ctx: Ctx, event: Event) -> Step:
t = load_meds_texts().question
if await current_prescription(ctx) is None:
return Step(replies=[menu_reply(ctx, t.no_prescription)])
return Step(replies=[Reply(text=t.prompt)], next_state=QUESTION_STATE)
return Step(replies=[Reply(text=t.prompt, kind="question")], next_state=QUESTION_STATE)
async def answer_question(ctx: Ctx, rx: Rx | None) -> str: